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Systematic Characterization of the Expression and Prognostic Values of Formin-Like Gene Family in Gastric Cancer.

胃癌中二甲双胍样基因家族表达和预后价值的系统表征。

  • 影响因子:2.78
  • DOI:10.1089/dna.2020.5508
  • 作者列表:"Nie H","Mei J","Zhang Q","An F","Zhan Q
  • 发表时间:2020-06-16
Abstract

:Formin-like genes (FMNLs) are members of formins family and have been implicated to the development and progression of multiple cancers. This research aims to analyze the expression profiles, prognostic values, and immune infiltrating associations of FMNLs in gastric cancer (GC) using multiple online bioinformatics website, including Oncomine, UALCAN, Kaplan-Meier Plotter, TIMER, GeneMANIA, DAVID, and LinkedOmics databases. The mRNA levels of FMNL1/2/3 were higher in GC tissues than normal. Meanwhile, FMNLs expressions tend to be upregulated in advanced and poorly differentiated GC. Prognostic value analysis suggested that high transcription levels of FMNL1/3 were associated with poor overall survival in GC patients. Correlation analysis between FMNLs expressions and immune infiltrating GC revealed that the expressions of FMNLs were significantly associated with immune infiltrating. Protein-protein interaction network and enrichment analysis of FMNLs in GC showed that FMNLs coexpressed genes mainly participated in organizing actin cytoskeleton through affecting small G proteins activity. Moreover, Gene Set Enrichment Analysis (GSEA) analysis uncovered FMNLs and their coexpressed genes was tightly associated with immune-related cellular functions. These findings demonstrate that FMNLs might play significant immunomodulatory roles in tumor immunity and could be novel therapeutic targets and potential prognostic biomarkers in GC.

摘要

: 二甲双胍样基因 (FMNLs) 是 formins 家族的成员,与多种癌症的发生和发展有关。本研究旨在使用多个在线生物信息学网站分析胃癌 (GC) 中 FMNLs 的表达谱、预后价值和免疫浸润相关性,包括 Oncomine 、 UALCAN 、 Kaplan-Meier 绘图仪、 TIMER 、 GeneMANIA 、 DAVID 和 linkdomics 数据库。GC 组织中 FMNL1/2/3 的 mRNA 水平高于正常组织。同时,FMNLs 表达在晚期和低分化 GC 中倾向于上调。预后价值分析表明,FMNL1/3 的高转录水平与 GC 患者的总生存期差相关。FMNLs 表达与免疫浸润 GC 的相关性分析发现,FMNLs 的表达与免疫浸润显著相关。蛋白质-蛋白质相互作用网络和 GC 中 FMNLs 的富集分析表明,FMNLs 共表达基因主要通过影响小 G 蛋白活性参与组织肌动蛋白细胞骨架。此外,基因集富集分析 (GSEA) 分析发现 FMNLs 及其共表达基因与免疫相关细胞功能密切相关。这些发现证明 FMNLs 可能在肿瘤免疫中发挥显著的免疫调节作用,并可能成为 GC 中新的治疗靶点和潜在的预后生物标志物。

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