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Accurate Nonendoscopic Detection of Barrett's Esophagus by Methylated DNA Markers: A Multisite Case Control Study.

甲基化 DNA 标记对 Barrett 食管的准确非内镜检测: 一项多位点病例对照研究。

  • 影响因子:4.03
  • DOI:10.14309/ajg.0000000000000656
  • 作者列表:"Iyer PG","Taylor WR","Johnson ML","Lansing RL","Maixner KA","Hemminger LL","Cayer FK","Yab TC","Devens ME","Slettedahl SW","Broderick BT","Mahoney DW","McGlinch MC","Berger CK","Foote PH","Giakomopoulos M","Allawi H","Smyrk TC","Wang KK","Katzka DA","Wolfsen HC","Burke JA","Ahlquist DA","Kisiel JB
  • 发表时间:2020-06-15
Abstract

INTRODUCTION:Nonendoscopic Barrett's esophagus (BE) screening may help improve esophageal adenocarcinoma outcomes. We previously demonstrated promising accuracy of methylated DNA markers (MDMs) for the nonendoscopic diagnosis of BE using samples obtained from a capsule sponge-on-string (SOS) device. We aimed to assess the accuracy of these MDMs in an independent cohort using a commercial grade assay. METHODS:BE cases had ≥ 1 cm of circumferential BE with intestinal metaplasia; controls had no endoscopic evidence of BE. The SOS device was withdrawn 8 minutes after swallowing, followed by endoscopy (the criterion standard). Highest performing MDMs from a previous study were blindly assessed on extracted bisulfite-converted DNA by target enrichment long-probe quantitative amplified signal (TELQAS) assays. Optimal MDM combinations were selected and analyzed using random forest modeling with in silico cross-validation. RESULTS:Of 295 patients consented, 268 (91%) swallowed the SOS device; 112 cases and 89 controls met the pre-established inclusion criteria. The median BE length was 6 cm (interquartile range 4-9), and 50% had no dysplasia. The cross-validated sensitivity and specificity of a 5 MDM random forest model were 92% (95% confidence interval 85%-96%) and 94% (95% confidence interval 87%-98%), respectively. Model performance was not affected by age, gender, or smoking history but was influenced by the BE segment length. SOS administration was well tolerated (median [interquartile range] tolerability 2 [0, 4] on 10 scale grading), and 95% preferred SOS over endoscopy. DISCUSSION:Using a minimally invasive molecular approach, MDMs assayed from SOS samples show promise as a safe and accurate nonendoscopic test for BE prediction.

摘要

引言: 非内镜 Barrett 食管 (BE) 筛查可能有助于改善食管腺癌预后。我们以前证明了甲基化 DNA 标记物 (MDMs) 使用从胶囊海绵串 (SOS) 装置获得的样本进行 BE 的非内镜诊断的有希望的准确性。我们旨在使用商业级试验在独立队列中评估这些 MDMs 的准确性。 方法: BE 病例有 ≥ 1厘米的环 BE 伴肠上皮化生; 对照组无 BE 的内镜证据。吞咽后 8 分钟取出 SOS 装置,随后进行内镜检查 (标准标准)。通过靶富集长探针定量扩增信号 (TELQAS) 试验,在提取的亚硫酸氢盐转化 DNA 上盲目评估来自先前研究的最高性能 MDMs。使用随机森林模型选择并分析最佳 MDM 组合,并进行计算机交叉验证。 结果: 295 例患者同意,268 例 (91%) 吞下 SOS 装置; 112 例病例和 89 例对照符合预先确定的纳入标准。BE 长度中位数为 6厘米 cm (四分位距 4-9),50% 无发育不良。5 MDM 随机森林模型的交叉验证敏感性和特异性分别为 92% (95% 置信区间 85%-96%) 和 94% (95% 置信区间 87%-98%)。模型性能不受年龄、性别或吸烟史的影响,但受 BE 段长度的影响。SOS 给药的耐受性良好 (10 级分级的中位 [四分位距] 耐受性 2 [0,4]),95% 的 SOS 优于内镜检查。 讨论: 使用微创分子方法,从 SOS 样本中分析的 MDMs 显示出作为 BE 预测的安全和准确的非内镜试验的前景。

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影响因子:1.24
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作者列表:["Shang L","Pei QS","Xu D","Liu JY","Liu J"]

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